Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Gm37722-201ENSMUST00000193757 208 ntBASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Gm27389-201ENSMUST00000183622 195 ntBASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb4Q91XX6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Gm36967-201ENSMUST00000193814 266 ntBASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb4Q91XX6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Gm18101-201ENSMUST00000215769 548 ntBASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Gm18032-201ENSMUST00000222541 538 ntBASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.16■□□□□ 0.34
Pcdhgb4Q91XX6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms