Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ddx41Q91VN6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Gm12895-201ENSMUST00000122214 226 ntBASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx41Q91VN6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.54■□□□□ 0.56
Ddx41Q91VN6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx41Q91VN6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms