Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.02■□□□□ 0.16
Vsx1Q91V10 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vsx1Q91V10 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.02■□□□□ 0.16
Vsx1Q91V10 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.02■□□□□ 0.15
Vsx1Q91V10 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Vsx1Q91V10 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vsx1Q91V10 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.02■□□□□ 0.15
Vsx1Q91V10 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.01■□□□□ 0.15
Vsx1Q91V10 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm14057-201ENSMUST00000120631 482 ntBASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vsx1Q91V10 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vsx1Q91V10 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16■□□□□ 0.15
Vsx1Q91V10 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16■□□□□ 0.15
Vsx1Q91V10 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16■□□□□ 0.15
Vsx1Q91V10 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16■□□□□ 0.15
Vsx1Q91V10 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vsx1Q91V10 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vsx1Q91V10 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vsx1Q91V10 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.99■□□□□ 0.15
Vsx1Q91V10 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.99■□□□□ 0.15
Vsx1Q91V10 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.99■□□□□ 0.15
Vsx1Q91V10 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.99■□□□□ 0.15
Vsx1Q91V10 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vsx1Q91V10 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.98■□□□□ 0.15
Vsx1Q91V10 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms