Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfpqQ8VIJ6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Odf3b-204ENSMUST00000227834 930 ntBASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfpqQ8VIJ6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Gm18115-201ENSMUST00000221209 621 ntBASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SfpqQ8VIJ6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SfpqQ8VIJ6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SfpqQ8VIJ6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms