Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cspg4Q8VHY0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Gm18187-201ENSMUST00000196476 984 ntBASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Gm7653-201ENSMUST00000214567 508 ntBASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cspg4Q8VHY0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Gm27437-201ENSMUST00000183429 107 ntBASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cspg4Q8VHY0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cspg4Q8VHY0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms