Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Gm13312-201ENSMUST00000119631 718 ntBASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Gm27867-201ENSMUST00000184778 125 ntBASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Dnajc28Q8VCE1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.66■□□□□ 0.42
Dnajc28Q8VCE1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Dnajc28Q8VCE1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dnajc28Q8VCE1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnajc28Q8VCE1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Rps4l-201ENSMUST00000071745 943 ntBASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms