Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Gm7889-201ENSMUST00000185591 958 ntBASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps39Q8R5L3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Gm36967-201ENSMUST00000193814 266 ntBASIC16.23■□□□□ 0.19
Vps39Q8R5L3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Vps39Q8R5L3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Gm43799-201ENSMUST00000201845 579 ntBASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.22■□□□□ 0.19
Vps39Q8R5L3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps39Q8R5L3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms