Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Gm20049-201ENSMUST00000219950 730 ntBASIC13.26□□□□□ -0.29
Nup35Q8R4R6 App-207ENSMUST00000227737 2827 ntBASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup35Q8R4R6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup35Q8R4R6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup35Q8R4R6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms