Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc9Q8R1J3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Zcchc9Q8R1J3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Gm15165-201ENSMUST00000118140 502 ntBASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Gm6376-201ENSMUST00000209407 580 ntBASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zcchc9Q8R1J3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zcchc9Q8R1J3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zcchc9Q8R1J3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gm27525-201ENSMUST00000184465 107 ntBASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms