Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Gm23634-201ENSMUST00000175071 91 ntBASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.14■□□□□ 0.66
Atf7Q8R0S1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atf7Q8R0S1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atf7Q8R0S1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Gm25016-201ENSMUST00000158399 131 ntBASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.14■□□□□ 0.65
Atf7Q8R0S1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Dancr-204ENSMUST00000132389 2347 ntBASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Atf7Q8R0S1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Gm11950-201ENSMUST00000121615 838 ntBASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf7Q8R0S1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.11■□□□□ 0.65
Atf7Q8R0S1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atf7Q8R0S1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms