Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Gm6345-202ENSMUST00000180900 204 ntBASIC15.31■□□□□ 0.04
Clrn1Q8K445 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.31■□□□□ 0.04
Clrn1Q8K445 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.31■□□□□ 0.04
Clrn1Q8K445 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clrn1Q8K445 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clrn1Q8K445 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.3■□□□□ 0.04
Clrn1Q8K445 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn1Q8K445 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.29■□□□□ 0.04
Clrn1Q8K445 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Gm17808-201ENSMUST00000200859 894 ntBASIC15.29■□□□□ 0.04
Clrn1Q8K445 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.29■□□□□ 0.04
Clrn1Q8K445 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn1Q8K445 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Gm11950-201ENSMUST00000121615 838 ntBASIC15.28■□□□□ 0.04
Clrn1Q8K445 Gm29518-201ENSMUST00000190858 372 ntBASIC15.28■□□□□ 0.04
Clrn1Q8K445 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.28■□□□□ 0.04
Clrn1Q8K445 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.28■□□□□ 0.04
Clrn1Q8K445 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms