Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Gm10167-201ENSMUST00000150411 1479 ntBASIC10.22□□□□□ -0.77
Cystm1Q8K353 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.21□□□□□ -0.77
Cystm1Q8K353 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.21□□□□□ -0.77
Cystm1Q8K353 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cystm1Q8K353 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.21□□□□□ -0.77
Cystm1Q8K353 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 App-207ENSMUST00000227737 2827 ntBASIC10.21□□□□□ -0.78
Cystm1Q8K353 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cystm1Q8K353 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.2□□□□□ -0.78
Cystm1Q8K353 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cystm1Q8K353 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.19□□□□□ -0.78
Cystm1Q8K353 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cystm1Q8K353 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.19□□□□□ -0.78
Cystm1Q8K353 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms