Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Rtn1Q8K0T0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn1Q8K0T0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn1Q8K0T0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Gm14859-201ENSMUST00000117752 357 ntBASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn1Q8K0T0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn1Q8K0T0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Rtn1Q8K0T0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms