Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Mir1668-201ENSMUST00000184114 107 ntBASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Gm2274-201ENSMUST00000184539 609 ntBASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.73■□□□□ 0.43
Sox30Q8CGW4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 BC037039-201ENSMUST00000192003 2205 ntBASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox30Q8CGW4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox30Q8CGW4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox30Q8CGW4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sox30Q8CGW4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox30Q8CGW4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox30Q8CGW4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox30Q8CGW4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox30Q8CGW4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms