Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Rpph1-201ENSMUST00000175096 319 ntBASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Mir449b-201ENSMUST00000104833 80 ntBASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rp1l1Q8CGM2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rp1l1Q8CGM2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Gm5745-201ENSMUST00000183748 313 ntBASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rp1l1Q8CGM2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rp1l1Q8CGM2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rp1l1Q8CGM2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rp1l1Q8CGM2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rp1l1Q8CGM2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rp1l1Q8CGM2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rp1l1Q8CGM2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms