Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc5Q8CG46 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.05■□□□□ 0.8
Smc5Q8CG46 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.05■□□□□ 0.8
Smc5Q8CG46 Gm13436-201ENSMUST00000120418 567 ntBASIC20.05■□□□□ 0.8
Smc5Q8CG46 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc5Q8CG46 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc5Q8CG46 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm22240-201ENSMUST00000175225 82 ntBASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm30025-201ENSMUST00000218555 728 ntBASIC20.03■□□□□ 0.8
Smc5Q8CG46 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm10812-201ENSMUST00000099864 546 ntBASIC20.03■□□□□ 0.8
Smc5Q8CG46 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc5Q8CG46 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Mir1668-201ENSMUST00000184114 107 ntBASIC20.02■□□□□ 0.8
Smc5Q8CG46 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc5Q8CG46 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms