Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup88Q8CEC0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup88Q8CEC0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup88Q8CEC0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup88Q8CEC0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Nup88Q8CEC0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.08■□□□□ 0.65
Nup88Q8CEC0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup88Q8CEC0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup88Q8CEC0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Nup88Q8CEC0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup88Q8CEC0 Mir770-201ENSMUST00000103252 94 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms