Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fam228aQ8CDW1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Timm23-208ENSMUST00000226683 750 ntBASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam228aQ8CDW1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Gm13186-201ENSMUST00000118031 316 ntBASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam228aQ8CDW1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam228aQ8CDW1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam228aQ8CDW1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Mir1199-201ENSMUST00000117015 119 ntBASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam228aQ8CDW1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms