Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcpip1Q8CDG3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcpip1Q8CDG3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcpip1Q8CDG3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcpip1Q8CDG3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcpip1Q8CDG3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Mir1668-201ENSMUST00000184114 107 ntBASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcpip1Q8CDG3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcpip1Q8CDG3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcpip1Q8CDG3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms