Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf31Q8CCF0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf31Q8CCF0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Gm28659-201ENSMUST00000188013 759 ntBASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf31Q8CCF0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prpf31Q8CCF0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Gm13216-201ENSMUST00000117145 591 ntBASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Gm25745-201ENSMUST00000174945 133 ntBASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.65■□□□□ 0.42
Prpf31Q8CCF0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms