Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynpoQ8CC35 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynpoQ8CC35 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynpoQ8CC35 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.69■□□□□ 0.1
SynpoQ8CC35 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.69■□□□□ 0.1
SynpoQ8CC35 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Mir770-201ENSMUST00000103252 94 ntBASIC15.69■□□□□ 0.1
SynpoQ8CC35 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynpoQ8CC35 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SynpoQ8CC35 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Gm45328-201ENSMUST00000210942 917 ntBASIC15.67■□□□□ 0.1
SynpoQ8CC35 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Gm18669-201ENSMUST00000216049 778 ntBASIC15.67■□□□□ 0.1
SynpoQ8CC35 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SynpoQ8CC35 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SynpoQ8CC35 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SynpoQ8CC35 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms