Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa4Q8CA71 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Gm25745-201ENSMUST00000174945 133 ntBASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa4Q8CA71 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm27459-201ENSMUST00000184860 107 ntBASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm5864-201ENSMUST00000202263 970 ntBASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shisa4Q8CA71 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44357-201ENSMUST00000195897 142 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm19658-201ENSMUST00000196231 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44367-201ENSMUST00000196836 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44350-201ENSMUST00000197197 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44390-201ENSMUST00000197533 144 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44313-201ENSMUST00000198018 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44486-201ENSMUST00000198508 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44314-201ENSMUST00000199263 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44394-201ENSMUST00000199558 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44484-201ENSMUST00000199873 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44466-201ENSMUST00000200264 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Gm44359-201ENSMUST00000200671 138 ntBASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa4Q8CA71 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa4Q8CA71 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa4Q8CA71 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa4Q8CA71 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Gm12644-201ENSMUST00000119935 606 ntBASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Gm37935-201ENSMUST00000192012 982 ntBASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa4Q8CA71 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa4Q8CA71 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms