Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alx1Q8C8B0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Alx1Q8C8B0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Gm24589-201ENSMUST00000116692 94 ntBASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Gm9172-201ENSMUST00000212092 954 ntBASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx1Q8C8B0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx1Q8C8B0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx1Q8C8B0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Gm7506-201ENSMUST00000207758 815 ntBASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Alx1Q8C8B0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms