Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim9Q8C7M3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.9■□□□□ 0.46
Trim9Q8C7M3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trim9Q8C7M3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim9Q8C7M3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim9Q8C7M3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.88■□□□□ 0.45
Trim9Q8C7M3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.88■□□□□ 0.45
Trim9Q8C7M3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim9Q8C7M3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim9Q8C7M3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms