Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc187Q8C5V8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc187Q8C5V8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Gm27646-201ENSMUST00000183989 110 ntBASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc187Q8C5V8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Gm12260-201ENSMUST00000122447 411 ntBASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc187Q8C5V8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Gm9727-201ENSMUST00000161387 555 ntBASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc187Q8C5V8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc187Q8C5V8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms