Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Ank2-226ENSMUST00000189368 339 ntBASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc60Q8C4J0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc60Q8C4J0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Mir3081-201ENSMUST00000175305 84 ntBASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc60Q8C4J0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc60Q8C4J0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Gm27357-201ENSMUST00000183754 135 ntBASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc60Q8C4J0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Gm13312-201ENSMUST00000119631 718 ntBASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Gm17807-201ENSMUST00000186869 298 ntBASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc60Q8C4J0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc60Q8C4J0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms