Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Gm11478-201ENSMUST00000117851 599 ntBASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd9Q8BYH8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.7□□□□□ -0.38
Chd9Q8BYH8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Gm13223-201ENSMUST00000118609 747 ntBASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 AY702102-202ENSMUST00000194651 1173 ntBASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd9Q8BYH8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Gm7222-201ENSMUST00000117512 906 ntBASIC12.68□□□□□ -0.38
Chd9Q8BYH8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd9Q8BYH8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Gm17968-201ENSMUST00000194902 784 ntBASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Gm7730-201ENSMUST00000212486 454 ntBASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd9Q8BYH8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms