Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Gm23634-201ENSMUST00000175071 91 ntBASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Actl10-202ENSMUST00000226583 1501 ntBASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trerf1Q8BXJ2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trerf1Q8BXJ2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trerf1Q8BXJ2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trerf1Q8BXJ2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trerf1Q8BXJ2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trerf1Q8BXJ2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Gm21559-201ENSMUST00000220638 855 ntBASIC17.07■□□□□ 0.32
Trerf1Q8BXJ2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms