Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Gm11539-201ENSMUST00000119837 557 ntBASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Gm27011-201ENSMUST00000182352 972 ntBASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptpn7Q8BUM3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptpn7Q8BUM3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Gm18115-201ENSMUST00000221209 621 ntBASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptpn7Q8BUM3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms