Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2bQ8BJF9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2bQ8BJF9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Gm10812-201ENSMUST00000099864 546 ntBASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp2bQ8BJF9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2bQ8BJF9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2bQ8BJF9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms