Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc40Q8BI79 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc40Q8BI79 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Ccdc40Q8BI79 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Ccdc40Q8BI79 Phf7-203ENSMUST00000226565 1971 ntBASIC16.89■□□□□ 0.3
Ccdc40Q8BI79 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Ccdc40Q8BI79 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Gm6433-201ENSMUST00000118634 875 ntBASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc40Q8BI79 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc40Q8BI79 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms