Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf38Q8BI21 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf38Q8BI21 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Mir6982-201ENSMUST00000184354 68 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms