Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Gm13836-201ENSMUST00000121159 501 ntBASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn3Q8BHH8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn3Q8BHH8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Gm18421-201ENSMUST00000204122 625 ntBASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn3Q8BHH8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Clrn3Q8BHH8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.21■□□□□ 0.02
Clrn3Q8BHH8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clrn3Q8BHH8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Gm9013-201ENSMUST00000132939 882 ntBASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clrn3Q8BHH8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clrn3Q8BHH8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms