Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Gm715-201ENSMUST00000117865 831 ntBASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Gm15375-201ENSMUST00000119510 849 ntBASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smndc1Q8BGT7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smndc1Q8BGT7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smndc1Q8BGT7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Smndc1Q8BGT7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.74■□□□□ 0.11
Smndc1Q8BGT7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms