Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim50Q810I2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim50Q810I2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim50Q810I2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.8■□□□□ 0.12
Trim50Q810I2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim50Q810I2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim50Q810I2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
Trim50Q810I2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim50Q810I2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim50Q810I2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim50Q810I2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.79■□□□□ 0.12
Trim50Q810I2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.79■□□□□ 0.12
Trim50Q810I2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim50Q810I2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.78■□□□□ 0.12
Trim50Q810I2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.78■□□□□ 0.12
Trim50Q810I2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Gm29518-201ENSMUST00000190858 372 ntBASIC15.78■□□□□ 0.12
Trim50Q810I2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Gm17808-201ENSMUST00000200859 894 ntBASIC15.78■□□□□ 0.12
Trim50Q810I2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim50Q810I2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim50Q810I2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms