Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Gm23935-201ENSMUST00000102303 57 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Gm24270-201ENSMUST00000102326 57 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Gm24245-201ENSMUST00000157318 57 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Mir6404-201ENSMUST00000183699 94 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp6nlQ80XC3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp6nlQ80XC3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp6nlQ80XC3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.83■□□□□ 0.44
Usp6nlQ80XC3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms