Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.45■□□□□ 0.06
Vrk1Q80X41 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Vrk1Q80X41 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Gm12350-201ENSMUST00000121208 462 ntBASIC15.44■□□□□ 0.06
Vrk1Q80X41 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.44■□□□□ 0.06
Vrk1Q80X41 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.44■□□□□ 0.06
Vrk1Q80X41 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Vrk1Q80X41 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.43■□□□□ 0.06
Vrk1Q80X41 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.43■□□□□ 0.06
Vrk1Q80X41 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.43■□□□□ 0.06
Vrk1Q80X41 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vrk1Q80X41 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm37935-201ENSMUST00000192012 982 ntBASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Gm7506-201ENSMUST00000207758 815 ntBASIC15.42■□□□□ 0.06
Vrk1Q80X41 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vrk1Q80X41 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.41■□□□□ 0.06
Vrk1Q80X41 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.41■□□□□ 0.06
Vrk1Q80X41 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vrk1Q80X41 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms