Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh19Q80TF3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Gm11452-201ENSMUST00000122376 690 ntBASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Gm18195-201ENSMUST00000207604 706 ntBASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh19Q80TF3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.85■□□□□ 0.13
Pcdh19Q80TF3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh19Q80TF3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms