Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rpap1Q80TE0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rpap1Q80TE0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rpap1Q80TE0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
Rpap1Q80TE0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC25■■□□□ 1.59
Rpap1Q80TE0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Rpap1Q80TE0 Gm13127-201ENSMUST00000118978 1389 ntBASIC25■■□□□ 1.59
Rpap1Q80TE0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rpap1Q80TE0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rpap1Q80TE0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
Rpap1Q80TE0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Gm27494-201ENSMUST00000184735 189 ntBASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Gm27321-201ENSMUST00000185021 205 ntBASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Gm16401-202ENSMUST00000197463 2074 ntBASIC24.99■■□□□ 1.59
Rpap1Q80TE0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC24.98■■□□□ 1.59
Rpap1Q80TE0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpap1Q80TE0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Rpap1Q80TE0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 AC155252.2-201ENSMUST00000226946 680 ntBASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Rpap1Q80TE0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rpap1Q80TE0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC24.95■■□□□ 1.59
Rpap1Q80TE0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Rpap1Q80TE0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC24.95■■□□□ 1.59
Rpap1Q80TE0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Gm18489-201ENSMUST00000172565 551 ntBASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Gm9682-201ENSMUST00000197505 556 ntBASIC24.95■■□□□ 1.58
Rpap1Q80TE0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Rpap1Q80TE0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rpap1Q80TE0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms