Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Csmd3Q80T79 Gm11424-201ENSMUST00000121929 829 ntBASIC11.02□□□□□ -0.64
Csmd3Q80T79 Gm25948-201ENSMUST00000175334 112 ntBASIC11.02□□□□□ -0.64
Csmd3Q80T79 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.02□□□□□ -0.64
Csmd3Q80T79 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Csmd3Q80T79 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Gm13823-201ENSMUST00000119930 345 ntBASIC11.02□□□□□ -0.65
Csmd3Q80T79 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.02□□□□□ -0.65
Csmd3Q80T79 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.02□□□□□ -0.65
Csmd3Q80T79 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.02□□□□□ -0.65
Csmd3Q80T79 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Gm18622-201ENSMUST00000219361 595 ntBASIC11.01□□□□□ -0.65
Csmd3Q80T79 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Gm15427-201ENSMUST00000117288 531 ntBASIC11.01□□□□□ -0.65
Csmd3Q80T79 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.01□□□□□ -0.65
Csmd3Q80T79 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Gm22175-201ENSMUST00000175007 78 ntBASIC11.01□□□□□ -0.65
Csmd3Q80T79 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.01□□□□□ -0.65
Csmd3Q80T79 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Csmd3Q80T79 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11□□□□□ -0.65
Csmd3Q80T79 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Csmd3Q80T79 Mir6404-201ENSMUST00000183699 94 ntBASIC11□□□□□ -0.65
Csmd3Q80T79 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11□□□□□ -0.65
Csmd3Q80T79 Gm20553-201ENSMUST00000204205 844 ntBASIC11□□□□□ -0.65
Csmd3Q80T79 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11□□□□□ -0.65
Csmd3Q80T79 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Csmd3Q80T79 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11□□□□□ -0.65
Csmd3Q80T79 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Gm11745-201ENSMUST00000121669 448 ntBASIC11□□□□□ -0.65
Csmd3Q80T79 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Csmd3Q80T79 Fgf17-202ENSMUST00000227123 1336 ntBASIC11□□□□□ -0.65
Csmd3Q80T79 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11□□□□□ -0.65
Csmd3Q80T79 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11□□□□□ -0.65
Csmd3Q80T79 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms