Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Psmb5-202ENSMUST00000227257 622 ntBASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38bQ80SY5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38bQ80SY5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf38bQ80SY5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf38bQ80SY5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf38bQ80SY5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Rprl3-201ENSMUST00000157400 290 ntBASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms