Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.93□□□□□ -0.02
Pif1Q80SX8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.92□□□□□ -0.02
Pif1Q80SX8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.92□□□□□ -0.02
Pif1Q80SX8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pif1Q80SX8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Gm12350-201ENSMUST00000121208 462 ntBASIC14.91□□□□□ -0.02
Pif1Q80SX8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Gm25925-201ENSMUST00000158314 306 ntBASIC14.91□□□□□ -0.02
Pif1Q80SX8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.91□□□□□ -0.02
Pif1Q80SX8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.91□□□□□ -0.02
Pif1Q80SX8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pif1Q80SX8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.9□□□□□ -0.02
Pif1Q80SX8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.9□□□□□ -0.02
Pif1Q80SX8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.9□□□□□ -0.02
Pif1Q80SX8 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.9□□□□□ -0.02
Pif1Q80SX8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms