Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm45612-201ENSMUST00000211320 160 ntBASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup188Q6ZQH8 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Gm5312-201ENSMUST00000203728 547 ntBASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Nup188Q6ZQH8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Gm18489-201ENSMUST00000172565 551 ntBASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup188Q6ZQH8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm23547-201ENSMUST00000158210 271 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm44335-201ENSMUST00000196879 141 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm44297-201ENSMUST00000198304 141 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm44346-201ENSMUST00000198851 141 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm11745-201ENSMUST00000121669 448 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Gm45747-201ENSMUST00000212203 999 ntBASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup188Q6ZQH8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm13216-201ENSMUST00000117145 591 ntBASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Mir1895-201ENSMUST00000122615 79 ntBASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm20949-201ENSMUST00000206478 952 ntBASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup188Q6ZQH8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup188Q6ZQH8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup188Q6ZQH8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms