Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Npc1l1Q6T3U4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1l1Q6T3U4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1l1Q6T3U4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Mir6404-201ENSMUST00000183699 94 ntBASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1l1Q6T3U4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1l1Q6T3U4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms