Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn10aQ6QIY3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Gm20553-201ENSMUST00000204205 844 ntBASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Rpph1-201ENSMUST00000175096 319 ntBASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn10aQ6QIY3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn10aQ6QIY3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Rprl2-201ENSMUST00000157150 290 ntBASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn10aQ6QIY3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn10aQ6QIY3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn10aQ6QIY3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms