Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 AC151286.1-201ENSMUST00000198489 145 ntBASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Gm15358-201ENSMUST00000119249 520 ntBASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd4Q6PDQ2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd4Q6PDQ2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Chd4Q6PDQ2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC21.02■□□□□ 0.95
Chd4Q6PDQ2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd4Q6PDQ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd4Q6PDQ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd4Q6PDQ2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Chd4Q6PDQ2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Gm15500-202ENSMUST00000071641 1019 ntBASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chd4Q6PDQ2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Gm38318-201ENSMUST00000195769 1706 ntBASIC21■□□□□ 0.95
Chd4Q6PDQ2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC21■□□□□ 0.95
Chd4Q6PDQ2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chd4Q6PDQ2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd4Q6PDQ2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21■□□□□ 0.95
Chd4Q6PDQ2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd4Q6PDQ2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Gm5177-201ENSMUST00000183092 997 ntBASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd4Q6PDQ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms