Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Gm21814-202ENSMUST00000203277 873 ntBASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Gm13186-201ENSMUST00000118031 316 ntBASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcd3Q6P9Z1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcd3Q6P9Z1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Mir5122-201ENSMUST00000175004 89 ntBASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms