Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Hdac4Q6NZM9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.14■□□□□ 0.5
Hdac4Q6NZM9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac4Q6NZM9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Gm17808-201ENSMUST00000200859 894 ntBASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac4Q6NZM9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.12■□□□□ 0.49
Hdac4Q6NZM9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gm25016-201ENSMUST00000158399 131 ntBASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gm29518-201ENSMUST00000190858 372 ntBASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.11■□□□□ 0.49
Hdac4Q6NZM9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms