Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Krt42Q6IFX2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Krt42Q6IFX2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Gm9731-201ENSMUST00000209480 747 ntBASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Krt42Q6IFX2 BC037039-201ENSMUST00000192003 2205 ntBASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.69■□□□□ 0.26
Krt42Q6IFX2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Krt42Q6IFX2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Gm42569-201ENSMUST00000200539 472 ntBASIC16.67■□□□□ 0.26
Krt42Q6IFX2 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.67■□□□□ 0.26
Krt42Q6IFX2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms