Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tgfbr1Q64729 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Gm38027-201ENSMUST00000192315 235 ntBASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tgfbr1Q64729 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tgfbr1Q64729 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tgfbr1Q64729 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tgfbr1Q64729 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Mir1199-201ENSMUST00000117015 119 ntBASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tgfbr1Q64729 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms